STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
INO80Chromatin-remodeling ATPase INO80. (1558 aa)    
Predicted Functional Partners:
RUVBL1
RuvB-like protein 1 (pontin 52).
    
 0.997
ACTR5
Actin-related protein 5.
    
 0.995
INO80C
INO80 complex subunit C.
    
 0.989
ENSSCAP00000021918
annotation not available
    
 0.982
ACTR8
Actin-related protein 8.
    
 0.978
RUVBL2
RuvB-like protein 2.
   
 0.978
NFRKB
Nuclear factor related to kappa-B-binding protein isoform X1.
   
 0.977
DMAP1
DNA methyltransferase 1-associated protein 1.
    
 0.930
ACTL6A
Actin-like protein 6A.
   
 0.920
INO80D
INO80 complex subunit D.
   
 0.912
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.