STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALS2Amyotrophic lateral sclerosis 2 protein. (1649 aa)    
Predicted Functional Partners:
RABGEF1
Rab5 GDP/GTP exchange factor isoform X1.
    
 0.959
ZFAND4
AN1-type zinc finger and ubiquitin domain-containing protein 1.
    
 0.944
RANBP2
RAN binding protein 2.
   
 0.748
GAPVD1
GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1.
    
 0.744
XPO5
Exportin-5.
    
 
 0.637
XPO6
Exportin-6 isoform X2.
    
 
 0.637
RSPH4A
Radial spoke head protein 4 homolog A.
    
 
 0.637
XPO1
Exportin-1.
    
 
 0.637
GDI2
Rab GDP dissociation inhibitor beta.
    
 0.636
RIN3
Ras and Rab interactor 2/3.
    
 0.614
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.