STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRY2Cryptochrome-2 isoform X1. (620 aa)    
Predicted Functional Partners:
ARNTL
Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X1.
   
 0.980
FBXL3
F-box and leucine-rich repeat protein 3.
    
 0.967
PER2
Period circadian protein homolog 2.
   
 0.923
CLOCK
Circadian locomoter output cycles protein kaput isoform X1.
    
 0.909
TIMELESS
LOW QUALITY PROTEIN: protein timeless homolog.
    
 0.903
PER3
Period circadian protein homolog 3 isoform X2.
   
 0.869
NPAS2
Neuronal PAS domain protein 2.
    
 0.797
LOC103813054
Cryptochrome DASH-like isoform X2.
  
 
0.784
LOC103822376
Cryptochrome-1-like.
  
 
0.758
CRY1
Cryptochrome-1.
  
 
0.756
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.