STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNAPC4SnRNA-activating protein complex subunit 4 isoform X1. (1467 aa)    
Predicted Functional Partners:
SNAPC1
SnRNA-activating protein complex subunit 1.
    
 0.998
SNAPC3
SnRNA-activating protein complex subunit 3 isoform X1.
    
 0.996
ENSSCAP00000014058
annotation not available
    
 0.973
GTF2A1
Transcription initiation factor TFIIA large subunit.
    
  0.883
GTF2A2
Transcription initiation factor TFIIA small subunit.
    
  0.881
TBPL2
Transcription initiation factor TFIID TATA-box-binding protein.
    
 0.801
TBP
Transcription initiation factor TFIID TATA-box-binding protein.
    
 0.801
GTF2B
Transcription initiation factor IIB isoform X1.
    
 0.796
GTF2A1L
General transcription factor IIA subunit 1 like.
    
  0.779
POLR3A
DNA-directed RNA polymerase III subunit RPC1.
   
 
 0.732
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.