STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCFC2Host cell factor 2 isoform X1. (899 aa)    
Predicted Functional Partners:
KMT2A
Histone-lysine N-methyltransferase 2A isoform X1.
   
 0.988
OGT
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X1.
   
 0.978
BAP1
LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase BAP1.
    
 0.978
ASH2L
Set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X2.
    
 0.976
PHF20
PHD finger protein 20 isoform X1.
    
 0.973
SETD1B
SET domain containing 1B, histone lysine methyltransferase.
   
 0.958
MGA
MAX gene-associated protein isoform X1.
    
  0.948
WDR5B
WD repeat-containing protein 5.
   
 0.936
DPY30
Protein dpy-30 homolog.
    
 0.926
WDR82
WD repeat domain 82.
   
 0.924
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.