Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000003175La-related protein 6-like. (270 aa)    
Predicted Functional Partners:
ITSN2
Intersectin-2 isoform X1.
    
 
 0.853
ITSN1
Intersectin-1 isoform X1.
    
 
 0.707
STRAP
Serine-threonine kinase receptor-associated protein.
    
 
 0.676
LYPLAL1
Lysophospholipase-like protein 1.
      
 0.614
PEX5L
PEX5-related protein isoform X2.
      
 0.611
SLC35D3
Solute carrier family 35 member D3.
      
 0.609
MAB21L3
Mab-21 like 3.
      
 0.598
GMNC
Geminin coiled-coil domain containing.
      
 0.581
SLC30A8
Solute carrier family 30 (zinc transporter), member 8.
      
 0.471
SLC30A3
Solute carrier family 30 (zinc transporter), member 3.
      
 0.471
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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