Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AOX1Aldehyde oxidase isoform X1. (1331 aa)    
Predicted Functional Partners:
ALDH1A3
LOW QUALITY PROTEIN: aldehyde dehydrogenase family 1 member A3.
   
 
 0.957
ACSF3
Acyl-CoA synthetase family member 3, mitochondrial isoform X2.
     
 0.944
ALDH1A1
Retinal dehydrogenase 1.
   
 
 0.927
LOC103817855
Cytochrome P450 family 3 subfamily A.
   
 
 0.922
BCO1
Beta,beta-carotene 15,15'-dioxygenase isoform X1.
   
 
 0.920
ENSSCAP00000012619
annotation not available
   
 
 0.918
ENSSCAP00000012624
annotation not available
   
 
 0.918
ENSSCAP00000012642
UDP-glucuronosyltransferase 1-1-like isoform X1.
   
 
 0.918
LOC103825989
UDP-glucuronosyltransferase 2A1-like.
   
 
 0.918
CYP26B1
Cytochrome P450 family 26 subfamily B member 1.
   
 
 0.914
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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