STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D30TBC1 domain family member 30 isoform X2. (848 aa)    
Predicted Functional Partners:
RAB9B
Ras-related protein Rab-9B isoform X1.
    
 0.606
WDR90
WD repeat-containing protein 90 isoform X3.
    
  0.564
NRIP3
Nuclear receptor-interacting protein 3.
    
 
 0.516
OCIAD2
OCIA domain-containing protein 2.
      
 0.516
LEMD3
LEM domain containing 3.
      
 0.512
NRDE2
Protein NRDE2 homolog.
    
 0.502
RAB7B
Ras-related protein Rab-7B.
    
 0.478
CUNH9orf116
LOW QUALITY PROTEIN: UPF0691 protein C9orf116 homolog.
      
 0.463
CDKN3
Cyclin-dependent kinase inhibitor 3 isoform X1.
    
 
 0.414
ENSSCAP00000004340
annotation not available
    
 
 0.414
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.