STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LEMD3LEM domain containing 3. (417 aa)    
Predicted Functional Partners:
SMAD1
Mothers against decapentaplegic homolog 1.
   
 
 0.858
CDC5L
Cell division cycle 5-like protein.
   
 
 0.796
RBM25
RNA-binding protein 25 isoform X1.
   
 0.735
SMAD3
Mothers against decapentaplegic homolog 3 isoform X1.
   
 
 0.677
LOC103824734
Mothers against decapentaplegic homolog 2-like isoform X1.
   
 
 0.677
SMAD2
Mothers against decapentaplegic homolog 2 isoform X1.
   
 
 0.677
LBR
Delta14-sterol reductase (lamin-B receptor).
     
 0.664
SF3B1
Splicing factor 3B subunit 1 isoform X1.
   
 0.656
PIGN
GPI ethanolamine phosphate transferase 1 isoform X1.
      
 0.623
LMNB2
Lamin-B2 isoform X1.
    
 0.613
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.