STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSRB3Methionine-R-sulfoxide reductase B3 isoform X1. (208 aa)    
Predicted Functional Partners:
MSRA
Mitochondrial peptide methionine sulfoxide reductase isoform X1.
 
 0.982
TXN
Thioredoxin 1.
   
 0.693
CAT
Catalase.
   
  
 0.536
MRPL20
39S ribosomal protein L20, mitochondrial.
   
 
 0.529
LEMD3
LEM domain containing 3.
      
 0.521
ENSSCAP00000010388
annotation not available
      
 0.521
ENSSCAP00000014214
annotation not available
  
 0.512
NME8
Thioredoxin domain-containing protein 3.
  
 0.512
CLPX
ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X4.
  
 
 0.479
CRBN
Protein cereblon isoform X1.
      
 0.463
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.