Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NECAB1LOW QUALITY PROTEIN: N-terminal EF-hand calcium-binding protein 1. (351 aa)    
Predicted Functional Partners:
EPB41L3
Erythrocyte membrane protein band 4.1 like 3.
    
 
 0.529
APBA2
Amyloid-beta A4 precursor protein-binding family A member 2 isoform X1.
   
 
 0.522
WDR24
WD repeat-containing protein 24.
     
 0.483
ZDHHC3
Palmitoyltransferase ZDHHC3 isoform X1.
    
 0.480
KCTD2
BTB/POZ domain-containing protein KCTD2/5/17.
    
 0.475
ENSSCAP00000022435
annotation not available
    
 
 0.461
EFR3A
Protein EFR3 homolog A isoform X1.
    
 
 0.426
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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