ACOX1 protein (Serinus canaria) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ACOX1

Peroxisomal acyl-coenzyme A oxidase 1 isoform X1. (747 aa)

Predicted Functional Partners:

SCP2

0.989

EHHADH

0.981

ACAA1

0.981

ECHS1

0.976

HADHB

0.972

ACOX3

0.967

ECHDC1

0.966

HADHA

0.966

ACAA2

0.965

ACAT1

0.960

Your Current Organism:

Serinus canaria

NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACAA1	ACAA2	ENSSCAP00000008638	ENSSCAP00000022573	LOW QUALITY PROTEIN: 3-ketoacyl-CoA thiolase, peroxisomal.	3-ketoacyl-CoA thiolase, mitochondrial.	0.914
ACAA1	ACAT1	ENSSCAP00000008638	ENSSCAP00000005926	LOW QUALITY PROTEIN: 3-ketoacyl-CoA thiolase, peroxisomal.	Acetyl-CoA acetyltransferase, mitochondrial isoform X2.	0.924
ACAA1	ACOX1	ENSSCAP00000008638	ENSSCAP00000003432	LOW QUALITY PROTEIN: 3-ketoacyl-CoA thiolase, peroxisomal.	Peroxisomal acyl-coenzyme A oxidase 1 isoform X1.	0.981
ACAA1	ACOX3	ENSSCAP00000008638	ENSSCAP00000021664	LOW QUALITY PROTEIN: 3-ketoacyl-CoA thiolase, peroxisomal.	Peroxisomal acyl-coenzyme A oxidase 3 isoform X1.	0.977
ACAA1	ECHDC1	ENSSCAP00000008638	ENSSCAP00000019504	LOW QUALITY PROTEIN: 3-ketoacyl-CoA thiolase, peroxisomal.	Ethylmalonyl-CoA/methylmalonyl-CoA decarboxylase.	0.959
ACAA1	ECHS1	ENSSCAP00000008638	ENSSCAP00000005134	LOW QUALITY PROTEIN: 3-ketoacyl-CoA thiolase, peroxisomal.	Enoyl-CoA hydratase, mitochondrial.	0.871
ACAA1	EHHADH	ENSSCAP00000008638	ENSSCAP00000007040	LOW QUALITY PROTEIN: 3-ketoacyl-CoA thiolase, peroxisomal.	Enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3,2-trans-enoyl-CoA isomerase.	0.988
ACAA1	HADHA	ENSSCAP00000008638	ENSSCAP00000021812	LOW QUALITY PROTEIN: 3-ketoacyl-CoA thiolase, peroxisomal.	Enoyl-CoA hydratase / long-chain 3-hydroxyacyl-CoA dehydrogenase.	0.985
ACAA1	HADHB	ENSSCAP00000008638	ENSSCAP00000021799	LOW QUALITY PROTEIN: 3-ketoacyl-CoA thiolase, peroxisomal.	Trifunctional enzyme subunit beta, mitochondrial.	0.918
ACAA1	SCP2	ENSSCAP00000008638	ENSSCAP00000007673	LOW QUALITY PROTEIN: 3-ketoacyl-CoA thiolase, peroxisomal.	Non-specific lipid-transfer protein.	0.977
ACAA2	ACAA1	ENSSCAP00000022573	ENSSCAP00000008638	3-ketoacyl-CoA thiolase, mitochondrial.	LOW QUALITY PROTEIN: 3-ketoacyl-CoA thiolase, peroxisomal.	0.914
ACAA2	ACAT1	ENSSCAP00000022573	ENSSCAP00000005926	3-ketoacyl-CoA thiolase, mitochondrial.	Acetyl-CoA acetyltransferase, mitochondrial isoform X2.	0.925
ACAA2	ACOX1	ENSSCAP00000022573	ENSSCAP00000003432	3-ketoacyl-CoA thiolase, mitochondrial.	Peroxisomal acyl-coenzyme A oxidase 1 isoform X1.	0.965
ACAA2	ACOX3	ENSSCAP00000022573	ENSSCAP00000021664	3-ketoacyl-CoA thiolase, mitochondrial.	Peroxisomal acyl-coenzyme A oxidase 3 isoform X1.	0.962
ACAA2	ECHDC1	ENSSCAP00000022573	ENSSCAP00000019504	3-ketoacyl-CoA thiolase, mitochondrial.	Ethylmalonyl-CoA/methylmalonyl-CoA decarboxylase.	0.957
ACAA2	ECHS1	ENSSCAP00000022573	ENSSCAP00000005134	3-ketoacyl-CoA thiolase, mitochondrial.	Enoyl-CoA hydratase, mitochondrial.	0.866
ACAA2	EHHADH	ENSSCAP00000022573	ENSSCAP00000007040	3-ketoacyl-CoA thiolase, mitochondrial.	Enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3,2-trans-enoyl-CoA isomerase.	0.984
ACAA2	HADHA	ENSSCAP00000022573	ENSSCAP00000021812	3-ketoacyl-CoA thiolase, mitochondrial.	Enoyl-CoA hydratase / long-chain 3-hydroxyacyl-CoA dehydrogenase.	0.987
ACAA2	HADHB	ENSSCAP00000022573	ENSSCAP00000021799	3-ketoacyl-CoA thiolase, mitochondrial.	Trifunctional enzyme subunit beta, mitochondrial.	0.951
ACAA2	SCP2	ENSSCAP00000022573	ENSSCAP00000007673	3-ketoacyl-CoA thiolase, mitochondrial.	Non-specific lipid-transfer protein.	0.790