STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE2J1Ubiquitin-conjugating enzyme E2 J1. (305 aa)    
Predicted Functional Partners:
UBE2V1
LOW QUALITY PROTEIN: ubiquitin-conjugating enzyme E2 variant 1.
   
 0.991
UBE2G2
Ubiquitin-conjugating enzyme E2 G2 isoform X1.
   
 0.979
UBE2G1
Ubiquitin-conjugating enzyme E2 G1.
     
0.960
SEL1L
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
    
 
 0.823
UBE2H
Ubiquitin conjugating enzyme E2 H.
   
 0.818
UBE2W
Ubiquitin-conjugating enzyme E2 W isoform X2.
     
 0.806
UBE2V2
Ubiquitin-conjugating enzyme E2 variant 2 isoform X1.
   
 0.798
TRIP12
E3 ubiquitin-protein ligase TRIP12 isoform X4.
    
 0.794
BIRC6
Baculoviral IAP repeat-containing protein 6 (apollon).
   
 0.794
UBA52
Ubiquitin-large subunit ribosomal protein L40e.
   
 0.771
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.