STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFTPDPulmonary surfactant-associated protein A. (192 aa)    
Predicted Functional Partners:
SFTPC
Surfactant protein C.
   
 
 0.824
CKAP4
Cytoskeleton-associated protein 4.
    
 0.573
ENSSCAP00000005705
Fibrinogen-like protein 1-like protein.
    
  0.438
TNC
LOW QUALITY PROTEIN: tenascin.
    
  0.438
TNR
Tenascin-R.
    
  0.438
PCYT1A
Choline-phosphate cytidylyltransferase A.
      
 0.436
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: medium (66%) [HD]