STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000003628annotation not available (441 aa)    
Predicted Functional Partners:
TNFSF8
Tumor necrosis factor ligand superfamily member 8.
  
 
 0.698
LOC103813616
Tumor necrosis factor receptor superfamily member 13C-like.
  
  
 0.585
TNFSF13B
Tumor necrosis factor ligand superfamily member 13B.
  
 
 0.563
EPRS1
Bifunctional glutamate/proline--tRNA ligase isoform X3.
      
 0.538
TNFSF11
TNF superfamily member 11.
   
 
 0.528
ENSSCAP00000011551
annotation not available
  
     0.512
ENSSCAP00000015075
annotation not available
  
     0.492
LOC103821640
Feather keratin 1-like.
  
     0.490
LOC103821640-2
Feather keratin 1-like.
  
     0.490
LOC103821640-3
Feather keratin 1-like.
  
     0.490
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.