STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRDReceptor-type tyrosine-protein phosphatase delta isoform X2. (1918 aa)    
Predicted Functional Partners:
NTRK3
Neurotrophic tyrosine kinase, receptor type 3.
    
 0.825
IL1RAP
Interleukin 1 receptor accessory protein.
    
 0.778
IL1RAPL2
X-linked interleukin-1 receptor accessory protein-like 2.
   
 0.740
ENSSCAP00000012247
Neurexin-3-beta isoform X1.
   
 
 0.696
SLITRK1
SLIT and NTRK-like protein 1.
    
 0.693
IL1RAPL1
Interleukin-1 receptor accessory protein-like 1.
    
 0.684
ENSSCAP00000002268
annotation not available
    
 0.667
NTRK2
BDNF/NT-3 growth factors receptor isoform X1.
    
 0.667
SLITRK2
SLIT and NTRK-like protein 2.
    
 0.632
ENSSCAP00000009647
Leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein.
   
 0.601
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.