STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000003668annotation not available (157 aa)    
Predicted Functional Partners:
DPY30
Protein dpy-30 homolog.
    
 0.852
WDR5B
WD repeat-containing protein 5.
   
  0.823
SETD1B
SET domain containing 1B, histone lysine methyltransferase.
    
  0.821
KMT2C
LOW QUALITY PROTEIN: histone-lysine N-methyltransferase 2C.
    
  0.813
WDR82
WD repeat domain 82.
    
  0.809
NCOA6
LOW QUALITY PROTEIN: nuclear receptor coactivator 6.
     
 0.808
KDM6A
Lysine-specific demethylase 6A isoform X3.
   
 0.735
BOD1L1
Biorientation of chromosomes in cell division protein 1-like 1 isoform X1.
   
 0.722
PAXIP1
LOW QUALITY PROTEIN: PAX-interacting protein 1.
   
 0.546
MDC1
Mediator of DNA damage checkpoint protein 1 isoform X2.
   
 0.546
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.