STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAP5Cytoskeleton-associated protein 5 isoform X1. (2072 aa)    
Predicted Functional Partners:
NDC80
Kinetochore protein NDC80 homolog.
    
 0.985
SLAIN2
SLAIN motif-containing protein 2 isoform X2.
    
 
 0.932
NUF2
Kinetochore protein Nuf2.
   
 
 0.905
TACC3
Transforming acidic coiled-coil-containing protein 3.
    
 
 0.897
MAPRE2
Microtubule associated protein RP/EB family member 2.
   
 
 0.890
MAPRE1
Microtubule-associated protein RP/EB family member 1 isoform X1.
   
 
 0.890
MAD2L1
Mitotic spindle assembly checkpoint protein MAD2A.
   
 0.865
TACC2
Transforming acidic coiled-coil-containing protein 2 isoform X9.
    
 
 0.835
BUB3
Mitotic checkpoint protein BUB3.
    
 0.791
WEE1
Wee1-like protein kinase isoform X1.
    
   0.784
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.