STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103822899Phospholipid-transporting ATPase ID-like. (1177 aa)    
Predicted Functional Partners:
TMEM30A
Cell cycle control protein 50A.
   
 0.620
LOC103820700
Cell cycle control protein 50C-like.
   
 0.582
ATP11B
Probable phospholipid-transporting ATPase IF isoform X2.
  
  
 
0.538
ATP8B1
Phospholipid-transporting ATPase IC.
  
  
 
0.530
ATP11A
Probable phospholipid-transporting ATPase IH isoform X3.
  
  
 
0.522
CCDC47
Coiled-coil domain-containing protein 47.
   
  0.498
ENSSCAP00000007351
annotation not available
    
 0.406
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.