STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQSEC3IQ motif and SEC7 domain-containing protein 3 isoform X1. (755 aa)    
Predicted Functional Partners:
ARF6
ADP-ribosylation factor 6.
    
 
 0.594
RBM43
RNA-binding protein 43 isoform X1.
      
 0.537
INSYN1
Inhibitory synaptic factor 1.
      
 0.537
ARL15
ADP-ribosylation factor-like protein 15 isoform X2.
    
 
 0.468
GPHN
Gephyrin.
      
 0.461
PPM1E
Protein phosphatase 1E.
   
  
 0.437
MYCBP2
LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase MYCBP2.
    
 
 0.414
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.