STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSUN45-methylcytosine rRNA methyltransferase NSUN4. (410 aa)    
Predicted Functional Partners:
MRM2
23S rRNA (uridine2552-2'-O)-methyltransferase.
  
 0.800
MTG1
Mitochondrial ribosome associated GTPase 1.
   
 0.783
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
 0.781
GTPBP4
Nucleolar GTP-binding protein 1.
   
 0.772
BRIX1
Ribosome biogenesis protein BRX1 homolog.
   
 0.765
EBNA1BP2
Probable rRNA-processing protein EBP2.
   
 0.759
BOP1
BOP1 ribosomal biogenesis factor.
   
 0.751
MALSU1
Mitochondrial assembly of ribosomal large subunit protein 1.
  
 
 0.748
NOC3L
Nucleolar complex protein 3 homolog.
   
 0.745
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
 0.737
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.