STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GGA2ADP-ribosylation factor-binding protein GGA2 isoform X1. (626 aa)    
Predicted Functional Partners:
SORL1
Sortilin-related receptor isoform X1.
    
 
 0.956
RABGEF1
Rab5 GDP/GTP exchange factor isoform X1.
    
 0.951
GGA3
ADP-ribosylation factor-binding protein GGA3 isoform X1.
  
0.937
GGA1
ADP-ribosylation factor-binding protein GGA1.
  
  
0.907
RABEP1
Rab GTPase-binding effector protein 1.
    
 0.825
IGF2R
Cation-independent mannose-6-phosphate receptor.
    
 
 0.780
H1-0
Histone H1/5.
      
 0.692
BACE1
Beta-site APP-cleaving enzyme 1 (memapsin 2).
    
 0.571
BACE2
Beta-site APP-cleaving enzyme 2 (memapsin 1).
    
 0.571
SORCS2
Sortilin related VPS10 domain containing receptor 2.
    
 
 0.539
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.