STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000004019annotation not available (802 aa)    
Predicted Functional Partners:
UBXN7
UBX domain-containing protein 7.
   
 0.999
UFD1
Ubiquitin recognition factor in ER-associated degradation protein 1 isoform X1.
    
 0.947
FAF2
FAS-associated factor 2.
   
 0.942
DERL1
Derlin-1.
   
 0.935
FAF1
FAS-associated factor 1.
   
 0.930
SELENOS
Selenoprotein S.
    
 0.927
VCPKMT
Protein N-lysine methyltransferase METTL21D.
   
 0.921
NSFL1C
UBX domain-containing protein 1.
   
 0.914
ENSSCAP00000002785
annotation not available
   
 0.909
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
   
 0.897
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.