Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103822936C-C motif chemokine 19. (99 aa)    
Predicted Functional Partners:
CCR7
C-C chemokine receptor type 7.
    
 0.989
ACKR4
LOW QUALITY PROTEIN: atypical chemokine receptor 4.
   
 0.982
CXCL12
Stromal cell-derived factor 1 isoform X1.
   
 0.925
CCR6
C-C chemokine receptor type 6.
    
 0.791
ENSSCAP00000007880
annotation not available
    
 0.700
CXCR5
C-X-C chemokine receptor type 5.
    
 0.667
LYVE1
Lymphatic vessel endothelial hyaluronic acid receptor 1.
   
  
 0.616
CXCR4
C-X-C chemokine receptor type 4.
    
 0.596
LOC103820036
C-C motif chemokine 5-like isoform X1.
     
 0.575
CCR10
C-C chemokine receptor type 10.
    
 0.567
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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