Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
OGFOD32-oxoglutarate and iron-dependent oxygenase domain-containing protein 3 isoform X1. (410 aa)    
Predicted Functional Partners:
ENSSCAP00000009779
annotation not available
   
  
 0.894
TMEM53
Transmembrane protein 53 isoform X3.
      
 0.891
PIGB
GPI mannosyltransferase 3.
      
 0.891
VRK2
Serine/threonine-protein kinase VRK2 isoform X2.
      
 0.891
ZDHHC6
Palmitoyltransferase ZDHHC6.
      
 0.891
TMEM214
Transmembrane protein 214.
      
 0.769
TMEM209
Transmembrane protein 209.
      
 0.721
GPAT4
Glycerol-3-phosphate O-acyltransferase 3/4.
      
 0.699
DNAJC16
DnaJ homolog subfamily C member 16.
    
 
 0.687
HSD11B1
Corticosteroid 11-beta-dehydrogenase isozyme 1-like.
      
 0.687
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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