STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHC2Polyhomeotic-like protein 2 isoform X1. (304 aa)    
Predicted Functional Partners:
CBX8
Chromobox protein homolog 8.
    
 0.869
CBX2
Chromobox 2.
    
 0.839
CBX7
LOW QUALITY PROTEIN: chromobox protein homolog 7.
    
 0.811
RNF2
E3 ubiquitin-protein ligase RNF1/2.
    
 0.798
CBX4
LOW QUALITY PROTEIN: E3 SUMO-protein ligase CBX4.
    
 0.783
CBX6
Chromobox protein homolog 6.
    
 0.743
PCGF2
Polycomb group ring finger 2.
    
 0.673
BMI1
Polycomb group RING finger protein 4.
    
 0.673
PCGF6
Polycomb group ring finger 6.
    
 0.668
PCGF5
Polycomb group RING finger protein 5 isoform X1.
    
 0.647
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.