STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM89AFamily with sequence similarity 89 member A. (169 aa)    
Predicted Functional Partners:
CDC16
Cell division cycle protein 16 homolog.
    
 0.999
ANAPC4
Anaphase-promoting complex subunit 4.
    
 0.999
CDC27
Cell division cycle protein 27 homolog isoform X3.
    
 0.999
ANAPC5
Anaphase-promoting complex subunit 5.
    
 0.999
ANAPC2
Anaphase-promoting complex subunit 2.
    
 0.999
ANAPC1
Anaphase-promoting complex subunit 1.
    
 0.999
CDC23
Cell division cycle protein 23 homolog.
    
 0.996
UBE2C
Ubiquitin-conjugating enzyme E2 C.
   
 0.992
ANAPC7
Anaphase-promoting complex subunit 7.
    
 0.966
HSPB11
Intraflagellar transport protein 25 homolog.
    
 0.954
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.