Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SVBPSmall vasohibin-binding protein. (68 aa)    
Predicted Functional Partners:
VASH1
Tubulinyl-Tyr carboxypeptidase 1.
    
 0.976
VASH2
Tubulinyl-Tyr carboxypeptidase 2.
    
 0.943
TTL
Tubulin---tyrosine ligase.
      
 0.702
BCS1L
Mitochondrial chaperone BCS1.
      
 0.682
TTLL7
Tubulin polyglutamylase TTLL7 isoform X2.
      
 0.682
TTLL6
Tubulin polyglutamylase TTLL6/13.
      
 0.558
KIAA0895
Uncharacterized protein KIAA0895 homolog.
      
 0.542
ENSSCAP00000007256
annotation not available
      
 0.471
ENSSCAP00000007281
annotation not available
      
 0.471
ENSSCAP00000016706
Protein PET117 homolog, mitochondrial.
      
 0.464
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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