Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ARV1Lipid intermediate transporter. (314 aa)    
Predicted Functional Partners:
PIGC
Phosphatidylinositol N-acetylglucosaminyltransferase subunit C.
   
 
 0.685
PIGH
Phosphatidylinositol glycan anchor biosynthesis class H.
    
 
 0.652
PIGQ
Phosphatidylinositol N-acetylglucosaminyltransferase subunit Q isoform X2.
    
 
 0.622
PIGY
Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y.
      
 0.605
ERN2
Endoplasmic reticulum to nucleus signaling 2.
    
   0.565
ERN1
Serine/threonine-protein kinase/endoribonuclease IRE1.
    
   0.565
DPM3
Dolichyl-phosphate mannosyltransferase subunit 3, regulatory.
      
 0.526
RNASEL
2-5A-dependent ribonuclease.
    
   0.526
PIGP
Phosphatidylinositol N-acetylglucosaminyltransferase subunit P.
    
 
 0.523
ERI1
3'-5' exoribonuclease 1 isoform X1.
      
 0.503
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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