STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMARCB1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1. (413 aa)    
Predicted Functional Partners:
SMARCC1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1.
   
 0.999
ACTL6A
Actin-like protein 6A.
   
 0.997
PBRM1
Protein polybromo-1 isoform X1.
    
 0.996
PHF10
PHD finger protein 10.
    
 0.993
MYSM1
Histone H2A deubiquitinase MYSM1.
   
 0.993
SMARCE1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E, member 1.
   
 0.992
ARID2
AT-rich interactive domain-containing protein 2.
    
 0.990
ARID4A
AT-rich interactive domain-containing protein 4A isoform X1.
   
 0.986
SMARCD2
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2.
   
 0.977
BRD7
Bromodomain-containing protein 7.
   
 0.966
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.