Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
METRNLMeteorin-like protein. (292 aa)    
Predicted Functional Partners:
EFHB
EF-hand domain-containing family member B.
   
 
 0.473
TSC1
Tuberous sclerosis 1.
    
 0.470
HSP90AA1
Heat shock protein HSP 90-alpha.
    
 0.470
TRAP1
Heat shock protein 75 kDa, mitochondrial.
    
 0.470
HSP90AB1
Heat shock protein HSP 90-beta isoform X1.
    
 0.470
EFCAB1
EF-hand calcium-binding domain-containing protein 1.
    
 0.455
B3GNTL1
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like protein 1 isoform X1.
      
 0.443
ENSSCAP00000008223
LOW QUALITY PROTEIN: coiled-coil domain-containing protein 102A.
      
 0.443
HSP90B1
Heat shock protein 90kDa beta.
    
 0.431
ENSSCAP00000000219
annotation not available
    
 0.422
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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