Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108961272Myb-related transcription factor, partner of profilin-like. (342 aa)    
Predicted Functional Partners:
NSF
Vesicle-fusing ATPase isoform X2.
   
 0.728
YKT6
Synaptobrevin homolog YKT6 isoform X1.
   
 0.718
GOSR2
Golgi SNAP receptor complex member 2.
    
 0.650
NAPG
Gamma-soluble NSF attachment protein.
   
 0.641
VAMP7
Vesicle-associated membrane protein 7 isoform X1.
   
 0.616
GOSR1
Golgi SNAP receptor complex member 1 isoform X1.
   
 
 0.595
VPS16
VPS16 core subunit of CORVET and HOPS complexes.
    
 
 0.592
VPS18
Vacuolar protein sorting-associated protein 18 homolog.
    
 
 0.589
VPS41
Vacuolar protein sorting-associated protein 41 homolog isoform X1.
    
 
 0.585
ENSSCAP00000003922
annotation not available
    
 0.579
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.