Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC103819895Protein ADP-ribosylarginine hydrolase-like isoform X1. (344 aa)    
Predicted Functional Partners:
UBE2F
Ubiquitin-conjugating enzyme E2 F.
    
 0.672
NEDD8
Ubiquitin-like protein Nedd8.
    
 0.581
UBXN7
UBX domain-containing protein 7.
     
 0.551
RNF7
RING-box protein 2 isoform X1.
    
 0.543
RBX1
E3 ubiquitin-protein ligase RBX1.
    
 0.543
CUL3
Cullin 3.
    
 0.518
CACUL1
CDK2-associated and cullin domain-containing protein 1 isoform X1.
    
 0.518
CUL1
Cullin-1 isoform X1.
    
 0.518
CUL5
Cullin 5.
   
 0.494
CUL4A
Cullin-4A isoform X1.
    
 0.484
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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