STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MIFMacrophage migration inhibitory factor. (115 aa)    
Predicted Functional Partners:
TAT
Tyrosine aminotransferase isoform X1.
     
 0.916
CD74
HLA class II histocompatibility antigen gamma chain isoform X1.
   
 0.914
GOT1
Glutamic-oxaloacetic transaminase 1.
     
 0.913
HPD
4-hydroxyphenylpyruvate dioxygenase.
     
 0.912
GOT2
Aspartate aminotransferase, mitochondrial.
   
 
 0.907
LOC103818238
Uncharacterized protein LOC103818238.
  
  
 
0.904
IL4I1
L-amino-acid oxidase.
     
  0.900
COPS5
COP9 signalosome complex subunit 5.
    
 
 0.787
RPS14
Small subunit ribosomal protein S14e.
   
 0.768
PEBP1
Phosphatidylethanolamine-binding protein 1.
   
 
 0.648
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.