Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
SARDHSarcosine dehydrogenase, mitochondrial. (902 aa)    
Predicted Functional Partners:
SHMT1
Serine hydroxymethyltransferase, cytosolic.
  
 0.987
GLDC
Glycine dehydrogenase (decarboxylating), mitochondrial.
  
 0.986
DHFR
Dihydrofolate reductase.
  
 
 0.981
PIPOX
Peroxisomal sarcosine oxidase isoform X1.
  
 0.970
GNMT
Glycine N-methyltransferase.
   
 
 0.969
MTHFD2L
Methylenetetrahydrofolate dehydrogenase(NAD+) / 5,10-methenyltetrahydrofolate cyclohydrolase.
  
 
 0.966
MTHFD2
Methylenetetrahydrofolate dehydrogenase(NAD+) / 5,10-methenyltetrahydrofolate cyclohydrolase.
  
 
 0.966
MTHFR
Methylenetetrahydrofolate reductase isoform X1.
  
 
 0.964
MTR
5-methyltetrahydrofolate--homocysteine methyltransferase.
  
 
 0.957
ENSSCAP00000015369
Probable low-specificity L-threonine aldolase 2 isoform X1.
   
 0.954
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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