STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103818003T-box-containing protein TBX6L. (452 aa)    
Predicted Functional Partners:
MSGN1
Mesogenin 1.
   
 0.809
RIPPLY2
Ripply transcriptional repressor 2.
     
 0.725
WNT3A
Wingless-type MMTV integration site family, member 3.
    
 0.681
ENSSCAP00000019648
annotation not available
    
 0.666
ENSSCAP00000005276
annotation not available
   
 
 0.635
CDX2
Homeobox protein CDX-2.
   
 
 0.628
XPO7
Exportin-7.
    
 
 0.615
ATRIP
ATR-interacting protein isoform X2.
      
 0.598
NHEJ1
Non-homologous end-joining factor 1 isoform X5.
      
 0.594
WNT3
Wnt family member 3.
    
 0.565
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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