STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103818003T-box-containing protein TBX6L. (452 aa)    
Predicted Functional Partners:
ENSSCAP00000019648
annotation not available
    
 0.679
MSGN1
Mesogenin 1.
   
 0.638
MEOX1
Homeobox protein MOX-1.
    
 
 0.553
WNT3A
Wingless-type MMTV integration site family, member 3.
    
 0.532
FGF8
Fibroblast growth factor 8.
      
 0.477
RIPPLY2
Ripply transcriptional repressor 2.
      
 0.469
TMEM108
Transmembrane protein 108 isoform X3.
      
 0.463
CPT2
Carnitine O-palmitoyltransferase 2, mitochondrial.
      
 0.463
ATRIP
ATR-interacting protein isoform X2.
      
 0.463
NHEJ1
Non-homologous end-joining factor 1 isoform X5.
      
 0.463
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.