STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLHL22Kelch-like protein 22. (638 aa)    
Predicted Functional Partners:
CUL3
Cullin 3.
    
 0.976
GLUD1
Glutamate dehydrogenase 1, mitochondrial isoform X1.
   
   0.829
RBX1
E3 ubiquitin-protein ligase RBX1.
    
 0.811
KLHL26
Kelch-like protein 26.
    
  0.759
UBXN7
UBX domain-containing protein 7.
    
 0.744
FBXO38
F-box only protein 38.
   
  
 0.724
KLHL34
Kelch-like protein 34.
    
  0.724
KLHL13
Kelch-like protein 13 isoform X1.
    
  0.724
TRIP12
E3 ubiquitin-protein ligase TRIP12 isoform X4.
     
 0.687
MICU2
Mitochondrial calcium uptake 2.
    
   0.645
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.