Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PIRTPhosphoinositide-interacting protein. (133 aa)    
Predicted Functional Partners:
ADPRM
Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase.
   
  
 0.684
TRPA1
Transient receptor potential cation channel subfamily A member 1.
      
 0.598
GAD2
Glutamate decarboxylase 2.
      
 0.582
RASD2
GTP-binding protein Rhes.
      
 0.529
MATN2
Matrilin-2 isoform X1.
      
 0.528
TMEM220
Transmembrane protein 220.
      
 0.528
LOC103817211
START domain-containing protein 10-like.
      
 0.504
STARD10
StAR-related lipid transfer protein 10.
      
 0.504
PDYN
Prodynorphin.
      
 0.451
SMCO3
Single-pass membrane and coiled-coil domain-containing protein 3.
  
    0.443
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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