STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PANX1Pannexin 1. (378 aa)    
Predicted Functional Partners:
PANX2
Pannexin-2 isoform X1.
     
 0.926
P2RX6
P2X purinoceptor 6.
     
 0.827
CASP7
Caspase 7.
    
 
 0.742
CASP3
Caspase-3 isoform X1.
    
 
 0.740
GRPR
Gastrin-releasing peptide receptor.
    
 
 0.716
GJB1
Gap junction beta-1 protein.
      
 0.686
GJA1
Gap junction alpha-1 protein.
      
 0.682
P2RX1
P2X purinoceptor 1.
     
 0.677
CALHM1
Calcium homeostasis modulator protein 1.
      
 0.643
P2RY1
P2Y purinoceptor 1.
      
 0.603
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.