STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ME1Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). (557 aa)    
Predicted Functional Partners:
LDHA
L-lactate dehydrogenase A chain.
  
 0.974
LDHB
L-lactate dehydrogenase B chain isoform X1.
  
 0.970
FH
Fumarate hydratase, mitochondrial isoform X2.
  
 
 0.964
MDH1
Malate dehydrogenase, cytoplasmic.
  
 0.954
MDH2
Malate dehydrogenase, mitochondrial.
  
 0.954
PDHB
Pyruvate dehydrogenase E1 component subunit beta, mitochondrial.
  
 
 0.949
PDHA1
Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial.
   
 0.949
PKM
Pyruvate kinase PKM isoform X1.
  
 0.944
ME2
Malate dehydrogenase (oxaloacetate-decarboxylating).
  
 
 
0.903
ME3
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
  
 
0.901
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.