Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NARS1Asparagine--tRNA ligase, cytoplasmic. (560 aa)    
Predicted Functional Partners:
EPRS1
Bifunctional glutamate/proline--tRNA ligase isoform X3.
  
 0.998
GATB
Aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B.
  
 0.972
IARS1
Isoleucine--tRNA ligase, cytoplasmic isoform X1.
  
 0.958
QRSL1
Aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A.
   
 0.941
YARS1
Tyrosine--tRNA ligase, cytoplasmic.
  
 0.940
SLX1B
Structure-specific endonuclease subunit SLX1 isoform X1.
   
 0.936
LARS1
Leucine--tRNA ligase, cytoplasmic.
  
 0.923
MARS1
methionyl-tRNA synthetase 1.
  
 0.912
NARS2
asparaginyl-tRNA synthetase 2, mitochondrial.
  
 
0.910
GATC
Aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C.
     
  0.900
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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