STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NARS1Asparagine--tRNA ligase, cytoplasmic. (560 aa)    
Predicted Functional Partners:
EPRS1
Bifunctional glutamate/proline--tRNA ligase isoform X3.
  
 0.999
MARS1
methionyl-tRNA synthetase 1.
  
 0.990
GATB
Aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B.
  
 0.986
WRN
Werner syndrome ATP-dependent helicase isoform X2.
   
 0.968
QRSL1
Aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A.
   
 0.953
YARS1
Tyrosine--tRNA ligase, cytoplasmic.
  
 0.942
ENSSCAP00000002502
annotation not available
  
 0.934
ENSSCAP00000023533
annotation not available
  
 0.934
ERCC4
DNA repair endonuclease XPF isoform X1.
  
 0.925
SLX1B
Structure-specific endonuclease subunit SLX1 isoform X1.
   
 0.920
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.