Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GUCD1Guanylyl cyclase domain containing 1. (200 aa)    
Predicted Functional Partners:
LRRC75B
Leucine-rich repeat-containing protein 75B.
 
    
 0.752
DCTN4
Dynactin subunit 4 isoform X1.
      
 0.693
LOC103818000
Glutathione S-transferase theta-1.
      
 0.684
UPB1
Beta-ureidopropionase.
      
 0.684
AFG1L
AFG1-like ATPase isoform X1.
      
 0.683
CLU
Clusterin.
      
 0.621
GSTT2B
Glutathione S-transferase theta-2B.
      
 0.553
SUSD2
Sushi domain-containing protein 2.
      
 0.535
ADD3
Gamma-adducin isoform X1.
      
 0.527
SEC63
Translocation protein SEC63 homolog.
      
 0.517
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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