STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPP1Tripeptidyl peptidase 1. (605 aa)    
Predicted Functional Partners:
POT1
Protection of telomeres protein 1.
    
 0.944
PPT1
Palmitoyl-protein thioesterase 1.
   
 
 0.890
CLN5
Ceroid-lipofuscinosis neuronal protein 5.
      
 0.699
CTC1
LOW QUALITY PROTEIN: CST complex subunit CTC1.
    
 0.679
TERT
Telomerase reverse transcriptase isoform X1.
   
 
 0.669
CLN8
Ceroid-lipofuscinosis neuronal protein 8.
    
 
 0.664
FLI1
Friend leukemia integration 1 transcription factor isoform X2.
    
 
 0.609
CLN6
CLN6 transmembrane ER protein.
    
 0.579
CLN6-2
LOW QUALITY PROTEIN: ceroid-lipofuscinosis neuronal protein 6.
    
 0.579
MFSD8
MFS transporter, ceroid-lipofuscinosis neuronal protein 7.
    
 
 0.578
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.