STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPT1ACarnitine O-palmitoyltransferase 1, liver isoform. (770 aa)    
Predicted Functional Partners:
ACSL1
Long-chain-fatty-acid--CoA ligase 1.
   
 
 0.953
ACSL3
Long-chain-fatty-acid--CoA ligase 3.
   
 
 0.947
ACACB
Acetyl-CoA carboxylase / biotin carboxylase 2.
     
 0.936
ACSL5
Long-chain-fatty-acid--CoA ligase 5.
   
 
 0.931
ACSL4
Long-chain-fatty-acid--CoA ligase 4 isoform X2.
   
 
 0.930
ACSL6
acyl-CoA synthetase long chain family member 6.
   
 
 0.925
CPT2
Carnitine O-palmitoyltransferase 2, mitochondrial.
  
 
0.923
ACSBG2
Long-chain-fatty-acid--CoA ligase ACSBG2.
   
 
 0.914
ACSBG1
Long-chain-fatty-acid--CoA ligase ACSBG1 isoform X1.
   
 
 0.912
GPAT4
Glycerol-3-phosphate O-acyltransferase 3/4.
      
 0.876
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.