STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPAM1Hyaluronidase PH-20 isoform X1. (501 aa)    
Predicted Functional Partners:
GUSB
Beta-glucuronidase.
     
 0.951
IDUA
Alpha-L-iduronidase.
    
 0.918
ARSB
Arylsulfatase B isoform X3.
     
 0.911
TNFAIP6
Tumor necrosis factor-inducible gene 6 protein.
    
 0.894
TECTB
Beta-tectorin.
      
 0.718
WBP2NL
Postacrosomal sheath WW domain-binding protein.
   
  
 0.687
SMPD1
Sphingomyelin phosphodiesterase 1.
      
 0.673
ADAM15
Disintegrin and metalloproteinase domain-containing protein 15.
   
 
 0.636
ADAM12
Disintegrin and metalloproteinase domain-containing protein 12 isoform X1.
   
 
 0.636
ADAM20
Disintegrin and metalloproteinase domain-containing protein 20-like.
   
 
 0.636
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.