STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RHOBTB1Rho-related BTB domain-containing protein 1/2. (694 aa)    
Predicted Functional Partners:
KLHL13
Kelch-like protein 13 isoform X1.
    
  0.904
RHOBTB2
Rho-related BTB domain-containing protein 1/2.
  
  
 
0.901
CUL3
Cullin 3.
    
 0.899
ITSN2
Intersectin-2 isoform X1.
    
 0.840
TRIO
Triple functional domain protein isoform X1.
    
 0.792
GPS1
COP9 signalosome complex subunit 1.
    
  0.765
ENSSCAP00000015603
annotation not available
    
 0.735
ITSN1
Intersectin-1 isoform X1.
    
 0.715
PDE5A
CGMP-specific 3',5'-cyclic phosphodiesterase isoform X5.
    
 0.687
COPS7A
COP9 signalosome complex subunit 7a.
    
   0.655
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.