Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARID5BAT-rich interactive domain-containing protein 5B. (1113 aa)    
Predicted Functional Partners:
C16orf87
UPF0547 protein C16orf87 homolog.
    
 
 0.940
MIER1
Mesoderm induction early response protein 1.
    
   0.925
FOXG1
Forkhead box G1.
    
 
 0.703
TRPS1
Transcriptional repressor GATA binding 1.
   
 
 0.693
EOMES
LOW QUALITY PROTEIN: eomesodermin homolog.
   
 
 0.687
ALPK3
Alpha kinase 3.
   
 
 0.685
LYST
Lysosomal-trafficking regulator isoform X1.
      
 0.683
ENSSCAP00000011898
LOW QUALITY PROTEIN: histone lysine demethylase PHF8-like.
    
 0.656
KDM7A
[histone H3]-dimethyl-L-lysine9 demethylase.
    
 0.656
PHF2
Lysine-specific demethylase PHF2 isoform X1.
    
 0.656
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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