STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSGEPL1Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial. (415 aa)    
Predicted Functional Partners:
TPRKB
EKC/KEOPS complex subunit CGI121/TPRKB.
    
 0.963
TP53RK
TP53 regulating kinase and related kinases.
  
 0.962
YRDC
YrdC domain-containing protein, mitochondrial.
  
 
 0.783
LOC103816492
Uncharacterized protein LOC103816492.
  
 
 0.770
ACP1
Low molecular weight phosphotyrosine protein phosphatase.
    
  0.760
DCAKD
Dephospho-CoA kinase domain-containing protein isoform X1.
    
 0.674
EPRS1
Bifunctional glutamate/proline--tRNA ligase isoform X3.
  
 
 0.647
OSGEP
O-sialoglycoprotein endopeptidase.
    
 0.594
HMBS
Hydroxymethylbilane synthase.
  
  
 0.577
OLA1
Obg-like ATPase 1 isoform X1.
  
  
 0.575
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.