STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNF1ATranscription factor 1, hepatocyte nuclear factor 1-alpha. (631 aa)    
Predicted Functional Partners:
PCBD1
4a-hydroxytetrahydrobiopterin dehydratase.
    
 
 0.918
PCBD2
Pterin-4-alpha-carbinolamine dehydratase 2 isoform X2.
    
 
 0.727
HNF1B
Transcription factor 2, hepatocyte nuclear factor 1-beta.
   
 
0.701
SLC2A2
MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 2.
   
 
 0.601
HNF4G
Hepatocyte nuclear factor 4-gamma isoform X2.
   
 0.564
HNF4A
Hepatocyte nuclear factor 4-alpha isoform X2.
   
 0.564
ABCD2
ATP-binding cassette sub-family D member 2 isoform X1.
      
 0.539
ENSSCAP00000013538
annotation not available
     
 0.488
PDX1
Pancreatic and duodenal homeobox 1.
   
  
 0.486
ABCC8
ATP-binding cassette subfamily C (CFTR/MRP) member 8.
   
  
 0.476
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.