STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPPL3Signal peptide peptidase-like 3 isoform X2. (412 aa)    
Predicted Functional Partners:
ST3GAL4
CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X6.
      
 0.656
NAGPA
N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase.
      
 0.526
APIP
Methylthioribulose-1-phosphate dehydratase.
      
 0.521
LARGE1
LARGE xylosyl- and glucuronyltransferase 1.
      
 0.519
SLC35A1
Solute carrier family 35 (UDP-sugar transporter), member A1/2/3.
   
  
 0.474
DERL3
Derlin-2/3.
   
 0.474
DERL2
Derlin-2/3.
   
 0.474
DERL1
Derlin-1.
   
 0.474
SLC35A4
Solute carrier family 35 (probable UDP-sugar transporter), member A4.
   
  
 0.474
FAM98A
Protein FAM98A.
      
 0.465
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.